I have two demijohns with large gas inclusion flaws in the glass. I have had them for 20 years. They are fine. No problems. I consider those scratches trivial... Sort of. Read more below.
But.... I do not pressure vacuum transfer my wine. So they only have had atmospheric pressure applied. I state this only as a caveat.
What I am saying is... don't try to over think such things. Especially glass. Glass can be weird. In all cases. The most scored glass can take a beating beyond expectations, while the beautiful visual glass can shatter without notice.
How funny is glass? When I was a Chemistry student at University, I remember I dropped a flask into the wash basin. It bounced all over the wash basin like a golf ball teed off in a tiled room... without breaking. And only when it was "settling down" with low bounces, it shattered. Glass if weird.
So my point? Just use your glass. If they will break, they will break. Or not. So just use them.