These bugs, are they fruit flies?
They are know carriers of acetobacter (the most common family of bacteria that will convert wine to vinegar). One or two fruit flies should not really be a concern, but you do want to try and keep as many of those little *******s out as possible.
It is also good to try and keep as many of the seeds out of the wine as possible. Seeds will add a type of tannin that most people do not like (IMHO, it makes the wine bitter).
I dont think too many critters got in. Im also not sure if theyre fruit flies. Ill check tomorrow night online to see if the pictures match up. I'll also try to get the seeds out tomorrow night. The good thing is that the seeds settle to the bottom, so if I sanitize my arms I can just reach in and get handfuls out...
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